Extracting Insights from Biological Images
Connects Line Ends with the nearest labeled region
Change the color of pixels
Canny edge detector
Reconnecting discontinuous lines
k-medoids clustering of images according to the Haralick features
Image analysis pipeline
Import an Image File
Interactive object detection
Pixel Interpolation
Object detection
Proximity-based exclusion
Result Calculation and Summary
Scan Directory for Image Analysis
Extraction of Shape Features
Size-based exclusion
Combines the 'magick' and 'imager' packages to streamline image analysis, focusing on feature extraction and quantification from biological images, especially microparticles. By providing high throughput pipelines and clustering capabilities, 'biopixR' facilitates efficient insight generation for researchers (Schneider J. et al. (2019) <doi:10.21037/jlpm.2019.04.05>).