boinet1.5.0 package

Conduct Simulation Study of Bayesian Optimal Interval Design with BOIN-ET Family

boinet

BOIN-ET: Bayesian Optimal Interval Design for Dose-Finding Based on Ef...

create_boinet_tables

Create Report-Ready Tables from BOIN-ET Results

create_design_gt_table

Create GT Table for Design Parameters

create_oc_gt_table

Create GT Table for Operating Characteristics

extract_boinet_data

Extract Tidy Data from BOIN-ET Results

extract_design_summary

Extract Design Parameters Summary

extract_operating_characteristics

Extract Operating Characteristics in Tidy Format

format_boinet_results

Format BOIN-ET Results for Reporting

fp.logit

Fractional Polynomial Logistic Regression for Dose-Efficacy Modeling

gboinet

gBOIN-ET: Generalized Bayesian Optimal Interval Design for Ordinal Gra...

gridoptim

Grid Search Optimization for BOIN-ET Design Boundaries

launch.shinyapp

Launch the Shiny App

multi.iso

Model Averaging of Multiple Unimodal Isotonic Regression

obd.select

Optimal Biological Dose Selection

print.boinet

Print boinet

print.gboinet

Print gboinet

print.tite.boinet

Print tite.boinet

print.tite.gboinet

Print tite.gboinet

summary.boinet

Summary method for boinet objects

summary.gboinet

Summary method for gboinet objects

summary.tite.boinet

Summary method for tite.boinet objects

summary.tite.gboinet

Summary method for tite.gboinet objects

tite.boinet

TITE-BOIN-ET: Time-to-Event Bayesian Optimal Interval Design

tite.gboinet

TITE-gBOIN-ET: Time-to-Event Generalized BOIN Design for Ordinal Grade...

utility.scoring

Discrete Scoring Utility Function for Toxicity-Efficacy Trade-offs

utility.truncated.linear

Truncated Linear Utility Function for Toxicity-Efficacy Trade-offs

utility.weighted

Weighted Utility Function for Toxicity-Efficacy Trade-off

Bayesian optimal interval based on both efficacy and toxicity outcomes (BOIN-ET) design is a model-assisted oncology phase I/II trial design, aiming to establish an optimal biological dose accounting for efficacy and toxicity in the framework of dose-finding. Some extensions of BOIN-ET design are also available to allow for time-to-event efficacy and toxicity outcomes based on cumulative and pending data (time-to-event BOIN-ET: TITE-BOIN-ET), ordinal graded efficacy and toxicity outcomes (generalized BOIN-ET: gBOIN-ET), and their combination (TITE-gBOIN-ET). 'boinet' is a package to implement the BOIN-ET design family and supports the conduct of simulation studies to assess operating characteristics of BOIN-ET, TITE-BOIN-ET, gBOIN-ET, and TITE-gBOIN-ET, where users can choose design parameters in flexible and straightforward ways depending on their own application.

  • Maintainer: Yusuke Yamaguchi
  • License: MIT + file LICENSE
  • Last published: 2025-10-26