caretSDM1.2.3 package

Build Species Distribution Modeling using 'caret'

add_predictors

Add predictors to sdm_area

add_scenarios

Add scenarios to sdm_area

buffer_sdm

Create buffer around occurrences

caretSDM-package

caretSDM: Build Species Distribution Modeling using 'caret'

correlate_sdm

Correlation between projections

data_clean

Presence data cleaning routine

GBIF_data

Retrieve Species data from GBIF

gcms_ensembles

Ensemble GCMs into one scenario

input_sdm

input_sdm

is_input_sdm

is_class functions to check caretSDM data classes.

join_area

Join Area

occurrences_sdm

Occurrences Managing

pca_predictors

Predictors as PCA-axes

pdp_sdm

Model Response to Variables

plot_occurrences

S3 Methods for plot and mapview

predict_sdm

Predict SDM models in new data

prediction_change_sdm

Prediction Change Analysis

predictor_names

Predictors Names Managing

print.input_sdm

Print method for input_sdm

print.models

Print method for models

print.occurrences

Print method for occurrences

print.predictions

Print method for predictions

pseudoabsences

Obtain Pseudoabsences

sdm_area

Create a sdm_area object

sdm_as_stars

sdm_as_X functions to transform caretSDM data into other classes.

summary_sdm

Calculates performance across resamples

tidyverse-methods

Tidyverse methods for caretSDM objects

train_sdm

Train SDM models

tsne_sdm

tSNE

tuneGrid_sdm

Retrieve tuneGrid from models

use_esm

Ensemble of Small Models (ESM) in caretSDM

use_mem

MacroEcological Models (MEM) in caretSDM

varImp_sdm

Calculation of variable importance for models

vif_predictors

Calculate VIF

WorldClim_data

Download WorldClim v.2.1 bioclimatic data

write_ensembles

Write caretSDM data

Use machine learning algorithms and advanced geographic information system tools to build Species Distribution Modeling in a extensible and modern fashion.

  • Maintainer: Luíz Fernando Esser
  • License: MIT + file LICENSE
  • Last published: 2025-11-06