chemometrics1.4.4 package

Multivariate Statistical Analysis in Chemometrics

alr

additive logratio transformation

chemometrics

This package is the R companion to the book "Introduction to Multivari...

clr

centered logratio transformation

clvalidity

compute and plot cluster validity

delintercept

Delete intercept from model matrix

drawMahal

Draws ellipses according to Mahalanobis distances

ilr

isometric logratio transformation

knnEval

kNN evaluation by CV

lassocoef

Plot Lasso coefficients

lassoCV

CV for Lasso regression

lmCV

Repeated Cross Validation for lm

Moutlier

Plots classical and robust Mahalanobis distances

mvr_dcv

Repeated double-cross-validation for PLS and PCR

nipals

PCA calculation with the NIPALS algorithm

nnetEval

Neural network evaluation by CV

pcaCV

Determine the number of PCA components with repeated cross validation

pcaDiagplot

Diagnostics plot for PCA

pcaVarexpl

PCA diagnostics for variables

plotcompmvr

Component plot for repeated DCV

plotcompprm

Component plot for repeated DCV of PRM

plotpredmvr

Plot predictions from repeated DCV

plotpredprm

Plot predictions from repeated DCV of PRM

plotprm

Plot results from robust PLS

plotresmvr

Plot residuals from repeated DCV

plotresprm

Plot residuals from repeated DCV of PRM

plotRidge

Plot results of Ridge regression

plotSEPmvr

Plot SEP from repeated DCV

plotSEPprm

Plot trimmed SEP from repeated DCV of PRM

plotsom

Plot SOM results

pls_eigen

Eigenvector algorithm for PLS

pls1_nipals

PLS1 by NIPALS

pls2_nipals

PLS2 by NIPALS

prm

Robust PLS

prm_cv

Cross-validation for robust PLS

prm_dcv

Repeated double-cross-validation for robust PLS

ridgeCV

Repeated CV for Ridge regression

RPvectors

Generating random projection directions

sd_trim

Trimmed standard deviation

stepwise

Stepwise regression

svmEval

Support Vector Machine evaluation by CV

treeEval

Classification tree evaluation by CV

R companion to the book "Introduction to Multivariate Statistical Analysis in Chemometrics" written by K. Varmuza and P. Filzmoser (2009).