PhenoFlex_fixedDynModelGAUSSwrapper function

PhenoFlex_fixedDynModelGAUSSwrapper

PhenoFlex wrapper function for the phenologyFitter function using the GAUSS heat accumulation model and parameters of the dynamical model fixed.

PhenoFlex_fixedDynModelGAUSSwrapper(
  x,
  par,
  A0 = 139500,
  A1 = 2.567e+18,
  E0 = 4153.5,
  E1 = 12888.8,
  slope = 1.6,
  Tf = 4
)

Arguments

• x: data.frame with at least columns Temp and JDay
• par: numeric vector of length 11 with the PhenoFlex fit parameters in the following order: 1. yc, 2. zc, 3. s1, 4. Tu, 5. E0, 6. E1, 7, A0, 8. A1, 9. Tf, 10. Tc, 11. Tb and 12. slope. For details see PhenoFlex
• A0: numeric. Parameter $A0$ of the dynamic model
• A1: numeric. Parameter $A1$ of the dynamic model
• E0: numeric. Parameter $E0$ of the dynamic model
• E1: numeric. Parameter $E1$ of the dynamic model
• slope: numeric. Slope parameter for sigmoidal function
• Tf: numeric. Transition temperature (in degree Kelvin) for the sigmoidal function

Returns

A single numeric value with the JDay prediction for the temperaturs in x$Temp and the PhenoFlex parameters in par.