plot-refMFI function

Plot refMFI objects

Draw quick diagnostic plots of amplification reaction.

## S4 method for signature 'refMFI'
plot(x, CV = FALSE, type = "p", pch = 19, length = 0.05, 
                        col = "black")
## S4 method for signature 'refMFI,refMFI'
plot(x, y, CV = FALSE, type = "p", pch = 19, length = 0.05, 
                        col = "black")

Arguments

• x: is a refMFI object. refMFI means referenced Mean Fluorescence Intensity (Roediger et al. 2013)
• y: optionally an additional refMFI object.
• CV: If CV is true the coefficient of variation (RSD, CV) is plotted. If set to FALSE the deviation as Standard Deviation or Median Absolute Deviation is plotted.
• type: is a graphical parameter setting the plot use lines, points or both (see plot).
• pch: is a graphical parameter used to define the symbol used in the plot.
• length: length is a graphical parameter used to define the length of the error bar used in the plot.
• col: col is a graphical parameter used to define the length of the error bar used in the plot.

Details

This function is a relative of the MFIerr function from the MBmca package (Roediger et al. 2013, The R Journal). The plot being a result of this function is built from three subplots. If y parameter is not absent, it is plotted in lighter color than x.

Returns

No return value, called for side effects.

Author(s)

Stefan Roediger, Michal Burdukiewicz

References

Roediger S, Boehm A, Schimke I. Surface Melting Curve Analysis with R. The R Journal 2013;5:37--53.

See Also

refMFI