Validation of Clustering Results
Change annotation list to matrix
Biological Homogeneity Index
Biological Stability Index
Class "clValid"
Internal clValid functions
Validate Cluster Results
Connectivity Measure
Dunn Index
Extract ranks and weights from clValid object
Plot Function for a SOTA Object
Print Function for a SOTA Object
Read in biological annotation files from external file
Self-organizing Tree Algorithm (SOTA)
Stability Measures
Statistical and biological validation of clustering results. This package implements Dunn Index, Silhouette, Connectivity, Stability, BHI and BSI. Further information can be found in Brock, G et al. (2008) <doi: 10.18637/jss.v025.i04>.