clustMD1.2.1 package

Model Based Clustering for Mixed Data

clustMD-package

Model based clustering for mixed data: clustMD

clustMD

Model Based Clustering for Mixed Data

clustMDlist

Model Based Clustering for Mixed Data

clustMDparallel

Run multiple clustMD models in parallel

clustMDparcoord

Parallel coordinates plot adapted for clustMD output

dtmvnom

Return the mean and covariance matrix of a truncated multivariate norm...

E.step

E-step of the (MC)EM algorithm

getOutput_clustMDparallel

Extracts relevant output from clustMDparallel object

M.step

M-step of the (MC)EM algorithm

modal.value

Calculate the mode of a sample

npars_clustMD

Calculates the number of free parameters for the clustMD model.

ObsLogLikelihood

Approximates the observed log likelihood.

patt.equal

Check if response patterns are equal

perc.cutoffs

Calculates the threshold parameters for ordinal variables.

plot.clustMD

Plotting method for objects of class clustMD

plot.clustMDparallel

Summary plots for a clustMDparallel object

print.clustMD

Print basic details of clustMD object.

print.clustMDparallel

Print basic details of clustMDparallel object

qfun

Helper internal function for dtmvnom()

stable.probs

Stable computation of the log of a sum

summary.clustMD

Summarise clustMD object

summary.clustMDparallel

Prints a summary of a clustMDparallel object to screen.

vec.outer

Calculate the outer product of a vector with itself

z.moments

Calculates the first and second moments of the latent data

z.moments_diag

Calculates the first and second moments of the latent data for diagona...

z.nom.diag

Transforms Monte Carlo simulated data into categorical data. Calculate...

Model-based clustering of mixed data (i.e. data which consist of continuous, binary, ordinal or nominal variables) using a parsimonious mixture of latent Gaussian variable models.

  • Maintainer: Damien McParland
  • License: GPL-2
  • Last published: 2017-05-08