corrcoverage1.2.1 package

Find approx. Bayes factors (ABFs)

Calculate ABFs from Z scores

Correlation matrix of SNPS

Corrected coverage estimate using Z-scores and MAFs

Corrected coverage estimate using estimated effect sizes and their sta...

Confidence interval for corrected coverage estimate using Z-scores and...

Confidence interval for corrected coverage estimate using estimated ef...

Corrected coverage estimate using Z-scores and MAFs (fixing nvar)

Corrected coverage estimate using estimated effect sizes and their sta...

Corrected coverage estimate of the causal variant in the credible set

Corrected credible set using Z-scores and MAFs

Corrected credible set using estimated effect sizes and their standard...

Credible set of genetic variants

Credible set of variants from matrix of PPs

Obtain credible sets from a matrix of posterior probabilities

Internal function: Simulate nrep ABFs from joint Z-score vector

Simulate posterior probabilities of causality from joint Z-score vecto...

Estimate the true effect at the causal variant using Z-scores and MAFs

Estimate the true effect at the causal variant using estimated effect ...

logsum

logsum rows of a matrix

Pipe operator

Find PPs of SNPs from matrix of Z-scores

Find PPs of SNPs from Z-scores

Proportion of credible sets containing the causal variant

Find PPs for SNPs and null model from P-values and MAFs

Variance of the estimated effect size for case-control data

Simulate marginal Z-scores from joint Z-score vector

Find PPs for SNPs and null model from Z-scores and MAFs

Simulate posterior probabilities of causality from joint Z-score vecto...