Fast Fitting of Stable Isotope Mixing Models with Covariates
cosimmr: An R package for Stable Isotope Mixing Models
Run a cosimmr_input object through the Fixed Form Variational Bayes(...
Function to load in cosimmr data and check for errors
Plot the cosimmr_input data created from cosimmr_load
Plot different features of an object created from cosimmr_ffvb.
Plot different features of an object created from cosimmr_ffvb.
Plot the posterior predictive distribution for a cosimmr run
Predicts proportion of each source in a mixture, based on values provi...
Print simmr input object
Print a simmr output object
Plot the prior distribution for a cosimmr run
Summarises the output created with cosimmr_ffvb
Summarises the output created with cosimmr_ffvb
Fast fitting of Stable Isotope Mixing Models in R. Allows for the inclusion of covariates. Also has built-in summary functions and plot functions which allow for the creation of isospace plots. Variational Bayes is used to fit these models, methods as described in: Tran et al., (2021) <doi:10.48550/arXiv.2103.01327>.