dmm2.1-10 package

Dyadic Mixed Model for Pedigree Data

chartodec

Convert a vector from character to decimal numbers

condense.dmmarray

Condense an object of type dmmarray to an object of type dmm

condense.dmmblockarray

Condense an object of type dmmblockarray to an object of type dmm

csummary.dmm

Make summary tables of (co)variance component estimates sorted into cl...

dmm-internal

Functions internal to dmm

dmm-package

Dyadic mixed model analysis for pedigree data

dmm

Fit a dyadic mixed model to pedigree data

gprint.dmm

Print method for genetic parameters contained in an object of class `d...

gprint

Generic function for printing genetic parameters contained in an objec...

gresponse.dmm

Compute response to selection, given phenotypic selection differential...

gsummary.dmm

Make summary tables of genetic parameters for a dmm object

make.countarray

Count the number of observations in a dataframe or an mdf object for...

make.ctable

Generates a list of vectors containing sets of variance component name...

make.dmmobj

Construct an object of class dmm from user-supplied data

mdf

Prepare a dataframe for use with dmm function

pedcheck

Checks that the Id, SId, and DId columns of a dataframe are valid for ...

pedrenum

Renumbers the Id, SId, and DId columns of a dataframe

plot.dmm

Plot residuals from fitting dyadic model

print.csummary.dmm

Print method for object of class csummary.dmm.

print.dmm

Print method for a dmm() fitted model object.

print.gresponse.dmm

Print method for object of class gresponse.dmm.

print.gsummary.dmm

Print method for object of class gsummary.dmm.

print.summary.dmm

Print method for an object of class summary.dmm.

summary.dmm

Make summary tables of (co)variance component estimates and fixed effe...

summary.gresponse.dmm

Summary method for object of class gresponse.dmm.

unfactor

Convert a vector from factor to numeric

warcolak.convert

Convert warcolak data file to format required for a dataframe for `d...

Dyadic mixed model analysis with multi-trait responses and pedigree-based partitioning of individual variation into a range of environmental and genetic variance components for individual and maternal effects. Method documented in dmmOverview.pdf; dmm is an implementation of dispersion mean model described by Searle et al. (1992) "Variance Components", Wiley, NY.

  • Maintainer: Neville Jackson
  • License: GPL-2 | GPL (>= 2) | GPL-3
  • Last published: 2024-06-03