Digital PCR Analysis
Class "adpcr" - end-point array digital PCR experiments
Convert adpcr object to array
Convert adpcr to ppp
Binarize digital PCR data
Bind dpcr objects
Analyze and plot a Bio-Rad droplet digital PCR experiment
Calculate Array Coordinates
Plot and Compare Densities
Class "count_test"
Create dpcR object
Quantify droplets
Convert data.frame to dpcr object
Digital PCR Density Graphical User Interface
Calculate Density of Multiple dPCR runs
Calculate Density of Single dPCR Run
Class "dpcr" - general digital PCR
Digital PCR Analysis
Convert dpcr object to data frame
Digital PCR Report Graphical User Interface
Extract Assays or Experiments
Extract Digital PCR Run
Limit Cy0 values
Calculate Moments of Poisson Distribution
Convert numeric to integer
Plot Panel
Amplitude Plot VIC and FAM Channels of a Droplet Digital PCR Experimen...
Plot qdpcr objects
Class "qdpcr"
qPCR Analyser
qPCR to Poisson Process
Read digital PCR amplitude raw data
Read BioMark
Read digital PCR data
Read QX100
Read QX200
Read digital PCR raw data
Rename object
Class "rtadpcr" - real-time array digital PCR experiments
Methods for Function show
Simulate Array Digital PCR
Simulate Droplet Digital PCR
Methods for Function summary
Compare digital PCR runs - interactive presentation
Test counts
Dispersion Test for Spatial Point Pattern in Array dPCR Based on Quadr...
Peak Test
Compare pooled digital PCR
Analysis, visualisation and simulation of digital polymerase chain reaction (dPCR) (Burdukiewicz et al. (2016) <doi:10.1016/j.bdq.2016.06.004>). Supports data formats of commercial systems (Bio-Rad QX100 and QX200; Fluidigm BioMark) and other systems.