Dynamic Structural Equation Models
Convert output from package dsem to phylopath
Convert dsem to sem output
Calculate conditional AIC
Classify variables path
Convert equations notation
Detailed control for dsem structure
Fit dynamic structural equation model
Fit dynamic structural equation model
List fixed and random effects
Marginal log-likelihood
Calculate leave-one-out residuals
Make text for dynamic factor analysis
Make a RAM (Reticular Action Model)
Make path matrices
Parse path
Partition variance in one variable due to another (EXPERIMENTAL)
Simulate dsem
predictions using dsem
Print fitted dsem object
Make a RAM (Reticular Action Model)
Calculate residuals
Simulate dsem
Simulate dsem
summarize dsem
Test d-separation
Calculate marginal AIC for a fitted model
Calculate total effects
Extract Variance-Covariance Matrix
Applies dynamic structural equation models to time-series data with generic and simplified specification for simultaneous and lagged effects. Methods are described in Thorson et al. (2024) "Dynamic structural equation models synthesize ecosystem dynamics constrained by ecological mechanisms."
Useful links