dynamite1.5.5 package

Bayesian Modeling and Causal Inference for Multivariate Longitudinal Data

as_draws-dynamitefit

Convert dynamite Output to draws_df Format

as.data.frame.dynamitefit

Extract Samples From a dynamitefit Object as a Data Frame

as.data.table.dynamitefit

Extract Samples From a dynamitefit Object as a Data Table

coef.dynamitefit

Extract Regression Coefficients of a dynamite Model

confint.dynamitefit

Credible Intervals for dynamite Model Parameters

dynamice

Estimate a Bayesian Dynamic Multivariate Panel Model With Multiple Imp...

dynamite-deprecated

Deprecated Functions in the dynamite Package

dynamite-package

The dynamite Package

dynamite

Estimate a Bayesian Dynamic Multivariate Panel Model

dynamiteformula

Model Formula for dynamite

fitted.dynamitefit

Extract Fitted Values of a dynamite Model

get_algorithm

Get the algorithm used in a Stan model fit

get_code

Extract the Stan Code of the dynamite Model

get_data

Extract the Model Data of the dynamite Model

get_diagnostics

Get the diagnostics of a Stan model fit

get_draws

Get the draws of a Stan model fit

get_elapsed_time

Get the elapsed time of a Stan model fit

get_max_treedepth

Get the maximum treedepth of chains of a Stan model fit

get_model_code

Get the model code of a Stan model fit

get_nchains

Get the number of chains of a Stan model fit

get_ndraws

Get the number of draws of a Stan model fit

get_parameter_dims

Get Parameter Dimensions of the dynamite Model

get_parameter_names

Get Parameter Names of the dynamite Model

get_parameter_types

Get Parameter Types of the dynamite Model

get_pars_oi

Get pars_oi of a Stan model fit

get_priors

Get Prior Definitions of a dynamite Model

hmc_diagnostics

HMC Diagnostics for a dynamite Model

lags

Add Lagged Responses as Predictors to Each Channel of a dynamite Mod...

lfactor

Define a Common Latent Factor for the dynamite Model.

lfo

Approximate Leave-Future-Out (LFO) Cross-validation

loo.dynamitefit

Approximate Leave-One-Out (LOO) Cross-validation

mcmc_diagnostics

Diagnostic Values of a dynamite Model

mice.impute.lag

Compute Lagging Values of an Imputed Response

mice.impute.lead

Compute Leading Values of an Imputed Response

ndraws.dynamitefit

Return the Number of Posterior Draws of a dynamitefit Object

nobs.dynamitefit

Extract the Number of Observations Used to Fit a dynamite Model

plot.dynamitefit

Plots for dynamitefit Objects

plot.dynamiteformula

Plot the Model Structure as a Directed Acyclic Graph (DAG)

plot.lfo

Diagnostic Plot for Pareto k Values from LFO

predict.dynamitefit

Predict Method for a dynamite Model

print.lfo

Print the results from the LFO

random_spec

Additional Specifications for the Group-level Random Effects of the DM...

splines

Define the B-splines Used for the Time-varying Coefficients of the Mod...

update.dynamitefit

Update a dynamite Model

Easy-to-use and efficient interface for Bayesian inference of complex panel (time series) data using dynamic multivariate panel models by Helske and Tikka (2024) <doi:10.1016/j.alcr.2024.100617>. The package supports joint modeling of multiple measurements per individual, time-varying and time-invariant effects, and a wide range of discrete and continuous distributions. Estimation of these dynamic multivariate panel models is carried out via 'Stan'. For an in-depth tutorial of the package, see (Tikka and Helske, 2024) <doi:10.48550/arXiv.2302.01607>.

  • Maintainer: Santtu Tikka
  • License: GPL (>= 3)
  • Last published: 2024-11-15