enrichR3.4 package

Provides an R Interface to 'Enrichr'

dot-add_background

Upload background list using Speedrichr API

dot-add_list

Upload gene list using Speedrichr API

dot-enrichment_prep_df

Given a Enrichr output, order and subset criteria, returns a data fram...

dot-formatGenes

FormatGenes

dot-get_backgroundenrich

Get enrichment result using Speedrichr API

dot-onAttach

onLoad hook to setup package options

dot-proxyOpts

Internal function to check RCurlOptions

dot-read_gmt

Download and parse GMT files from Enrichr

enrichR-package

enrichR package

enrichr

Gene enrichment using Enrichr

getEnrichr

Helper function for HTTP methods GET and POST

listEnrichrDbs

Look up available databases on Enrichr

listEnrichrSites

List Enrichr Websites

plotEnrich

plotEnrich

printEnrich

printEnrich

setEnrichrSite

Set Enrichr Website

Download source packageRead PDF manual

Provides an R interface to all 'Enrichr' databases. 'Enrichr' is a web-based tool for analysing gene sets and returns any enrichment of common annotated biological features. Quoting from their website 'Enrichment analysis is a computational method for inferring knowledge about an input gene set by comparing it to annotated gene sets representing prior biological knowledge.' See <https://maayanlab.cloud/Enrichr/> for further details.

  • Maintainer: Wajid Jawaid
  • License: GPL (>= 2)
  • Last published: 2025-02-02