Epistatic Network Modelling with Forward-Time Simulation
epinetr
Get additive coefficients.
Retrieve additive offset.
Get allele frequencies.
Get phenotypic components.
Epistatic network retrieval.
Retrieve epistatic offset.
Calculate epistatic interactions.
Get population unphased genotypes.
Retrieve haplotypes.
Incidence matrix retrieval.
Attach additive effects to population.
Attach epistatic network to population.
Retrieve interaction values.
Get population pedigree.
Get population phased genotypes.
QTL retrieval.
Get subpopulation
Load epinetr genotype file.
Plot epistatic network.
Plot phenotypic value for a population.
Population constructor.
Print function for population.
Run simulation on population.
Allows for forward-in-time simulation of epistatic networks with associated phenotypic output.