Spatially Explicit Population Models of Disease Transmission in Wildlife
Helper Function for Seasonal SIRI Simulation
Helper function to check the validity of inputs to the `siri_model_sum...
Helper function to check the validity of inputs to the `disease_simula...
Nested functions for population dispersal in a disease ecology simulat...
Nested functions for initializing, calculating and collecting disease ...
Stage-based seasonal spatially explicit population-level disease model...
Nested functions for a user-defined transformation of a population aff...
Nested functions for stage- and compartment-based population transitio...
R6 class representing a disease model of the **Mycoplasma gallisepticu...
epizootic: Spatially Explicit Population Models of Disease Transmissio...
R6 class representing a simulation handler.
Simulate a Mycoplasma gallisepticum Outbreak in the Breeding Seaso...
Simulate a Mycoplasma gallisepticum Outbreak in the Non-Breeding S...
This extension of the pattern-oriented modeling framework of the 'poems' package provides a collection of modules and functions customized for modeling disease transmission on a population scale in a spatiotemporally explicit manner. This includes seasonal time steps, dispersal functions that track disease state of dispersers, results objects that store disease states, and a population simulator that includes disease dynamics.
Useful links