Transform Files to 'microtable' Object with 'microeco' Package
Replace the names use match table
Read sample table
Introduction to file2meco package ([https://github.com/ChiLiubio/file2...
Transform 'HUMAnN' metagenomic results to 'microtable' object.
Transform 'microtable' object of 'microeco' package to the 'phyloseq' ...
Transform 'microtable' object of 'microeco' package to the 'TreeSummar...
Get the website for a 'MetaCyc' pathway name
Transform metagenomic classification results of 'mpa' format to 'micro...
Transform 'NCycDB' or 'PCycDB' metagenomic abundance to 'microtable' o...
Transform the 'phyloseq' object of 'phyloseq' package to 'microtable' ...
Transform 'QIIME' results to 'microtable' object.
Transform 'QIIME2' results to 'microtable' object.
Transform the 'TreeSummarizedExperiment' object to 'microtable' object...
Transform viromescan results to 'microtable' object.
Transform output files of some tools to the 'microtable' object of 'microtable' class in 'microeco' package. The 'microtable' class is the basic class in 'microeco' package and is necessary for the downstream microbial community data analysis.