genMCMCDiag0.2.3 package

Generalized Convergence Diagnostics for Difficult MCMC Algorithms

dpmmDistance

DPMM Distance

estimateTsTime

Uses generic formulas and rough time estimate to estimate time it will...

eucDist

Euclidean Distance

fitNN

Helpful mini function to fit the nearest neighbor (NN) algorithm given...

genDiagnostic

Generate Generalized Diagnostics for Markov Chain Monte Carlo Draws

genMCMCDiag-package

genMCMCDiag: Generalized Convergence Diagnostics for Difficult MCMC Al...

hammingDist

Hamming Distance

lanfearTransform

Transforms a list of MCMC chains into a list of data.frames using the ...

listLabels

Function to assign character labels to all unique objects in a list

partitionDist

Partition Distance

print.mcmcDiag

Print method for mcmcDiag objects

sess

Calculate the effective sample size, per chain and in total, of draws ...

spsrf

Calculate the Gelman-Rubin diagnostic of draws from an MCMC algorithm

standardTransform

Transforms a list of MCMC chains into a list of dataframes with no mod...

straceplot

Generate a traceplot of draws from a multi-chain MCMC

tsTransform

Transforms a list of MCMC chains into a list of data.frames using the ...

Download source packageRead PDF manual

Trace plots and convergence diagnostics for Markov Chain Monte Carlo (MCMC) algorithms on highly multivariate or unordered spaces. Methods outlined in a forthcoming paper.

  • Maintainer: Luke Duttweiler
  • License: MIT + file LICENSE
  • Last published: 2025-01-09

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