Vector of generalized partial correlation coefficients (GPCC), always leaving out control variables, if any.
Vector of generalized partial correlation coefficients (GPCC), always leaving out control variables, if any.
This function calls parcor_ijk function which uses original data to compute generalized partial correlations between Xi, the dependent variable, and Xj which is the current regressor of interest. Note that j can be any one of the remaining variables in the input matrix mtx. Partial correlations remove the effect of variables Xk other than Xi and Xj. Calculation merges control variable(s) (if any) into Xk. Let the remainder effect from kernel regressions of Xi on Xk equal the residuals u*(i,k). Analogously define u*(j,k). (asterisk for kernel regressions) Now partial correlation is generalized correlation between u*(i,k) and u*(j,k). Calculation merges control variable(s) (if any) into Xk.
parcorVec(mtx, ctrl =0, verbo =FALSE, idep =1)
Arguments
mtx: Input data matrix with p (> or = 3) columns
ctrl: Input vector or matrix of data for control variable(s), default is ctrl=0 when control variables are absent
verbo: Make this TRUE for detailed printing of computational steps
idep: The column number of the dependent variable (=1, default)
Returns
A p by 1 `out' vector containing partials r*(i,j | k).
Note
Generalized Partial Correlation Coefficients (GPCC) allow comparison of the relative contribution of each Xj to the explanation of Xi, because GPCC are scale-free pure numbers
We want to get all partial correlation coefficient pairs removing other column effects. Vinod (2018) shows why one needs more than one criterion to decide the causal paths or exogeneity.
Examples
set.seed(234)z=runif(10,2,11)# z is independently createdx=sample(1:10)+z/10#x is partly indep and partly affected by zy=1+2*x+3*z+rnorm(10)# y depends on x and z not vice versamtx=cbind(x,y,z)parcorVec(mtx)## Not run:set.seed(34);x=matrix(sample(1:600)[1:99],ncol=3)colnames(x)=c('V1','v2','V3')#some names neededparcorVec(x)## End(Not run)
Vinod, H. D. 'Matrix Algebra Topics in Statistics and Economics Using R', Chapter 4 in Handbook of Statistics: Computational Statistics with R, Vol.32, co-editors: M. B. Rao and C.R. Rao. New York: North Holland, Elsevier Science Publishers, 2014, pp. 143-176.