genogeographer0.1.19 package

Methods for Analysing Forensic Ancestry Informative Markers

app_genogeo

Shiny application for GenoGeoGrapher

bar_colour

bar_colour

error_bar_plot

Plot log likelihoods of profiles with approximate confidence intervals

exponent_tilt

P-values from Importing Sampling using Exponential tilting

genogeo

Likelihood ratio tests for AIMs

genogeographer

genogeographer: Methods for analysing forensic Ancestry Informative Ma...

kidd_loci

Kenn Kidd Lab markers

LR_table

Compute pairwise likelihood ratios

map_plot

Plot LTR z-scores on map

pops_to_DB

Pre-compute the scores for a given reference database

profile_AA_x0

Function that compute the genotype probability for each population (ro...

profile_admixture

Compute the z-score (and more) for admixed hypotheses

random_AIMs_profile

Simulate a random AIMs profile

seldin_loci

Seldin Lab markers

simulate_pops

Simulate random populations

Download source packageRead PDF manual

Evaluates likelihood ratio tests for alleged ancestry. Implements the methods of Tvedebrink et al (2018) <doi:10.1016/j.tpb.2017.12.004>.

  • Maintainer: Torben Tvedebrink
  • License: GPL (>= 2)
  • Last published: 2019-09-27