hicream0.0.4 package

HIC diffeREntial Analysis Method

AggloClust2D

Perform Constrained 2D Agglomerative Clustering

loadData

Load and Normalize Hi-C Data

performTest

Perform diffHic Test

postHoc

Perform Post Hoc Inference

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Perform Hi-C data differential analysis based on pixel-level differential analysis and a post hoc inference strategy to quantify signal in clusters of pixels. Clusters of pixels are obtained through a connectivity-constrained two-dimensional hierarchical clustering.

  • Maintainer: Elise Jorge
  • License: GPL (>= 3)
  • Last published: 2026-01-30

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