cc function

Calculate Cell cycle phase prediction

This function takes an object of class iCellR and assignes cell cycle stage for the cells.

cc(object = NULL, s.genes = s.phase, g2m.genes = g2m.phase)

Arguments

• object: A data frame containing gene counts for cells.
• s.genes: Genes that are used as a marker for S phase.
• g2m.genes: Genes that are used as a marker for G2 and M phase.

Returns

The data frame object