pseudotime function

Pseudotime

This function takes an object of class iCellR and marker genes for clusters and performs pseudotime analysis.

pseudotime(x = NULL, marker.genes = "NULL", dims = 1:10)

Arguments

• x: An object of class iCellR.
• marker.genes: A list of marker genes for clusters.
• dims: PC dimentions to be used, , default = 1:10.

Returns

An object of class iCellR.