Intelligent Predicting Response to Cancer Immunotherapy Through Systematic Modeling
Correlation Plot with Significance Points
Weighted Enrichment Score Calculation
Enrichment Score Calculation
Gene Set Enrichment Analysis (GSEA) using Multiplex Networks
Fit Logistic Regression Model
Gene Set Enrichment Analysis (GSEA) Function
Intelligent Predicting Response to Cancer Immunotherapy Through System...
Immunotherapy has revolutionized cancer treatment, but predicting patient response remains challenging. Here, we presented Intelligent Predicting Response to cancer Immunotherapy through Systematic Modeling (iPRISM), a novel network-based model that integrates multiple data types to predict immunotherapy outcomes. It incorporates gene expression, biological functional network, tumor microenvironment characteristics, immune-related pathways, and clinical data to provide a comprehensive view of factors influencing immunotherapy efficacy. By identifying key genetic and immunological factors, it provides an insight for more personalized treatment strategies and combination therapies to overcome resistance mechanisms.