Intraclass Correlation Coefficient for Count Data
CD34+ count cell data
Dispersion test for GLMM
Sparrow fledglings paternity data
Estimates GLMM. Concordance setting.
Estimates GLMM. Repeatability setting.
Goodness of fit for GLMM
Tick counts data
Intraclass correlation coefficient (ICC) for count data
Prints the intraclass correlation coefficient
Bland-Altman plot
Goodness of fit plots
ICC concordance for zero-inflated models
ICC concordance
ICC repeatability for zero-inflated models
ICC repeatability
ICC for Negative Binomial with additive extradispersion. Concordance s...
ICC for Negative Binomial with additive extradispersion. Repeatability...
ICC for Negative Binomial with proportional extradispersion. Concordan...
ICC for Negative Binomial with proportional extradispersion. Repeatabi...
ICC Poisson model. Repeatability setting
ICC Poisson model. Concordance setting
ICC for Zero-Inflated Negative Binomial with additive extradispersion....
ICC for Zero-Inflated Negative Binomial with additive extradispersion....
ICC for Zero-Inflated Negative Binomial with proportional extradispers...
ICC for Zero-Inflated Negative Binomial with proportional extradispers...
ICC Zero-Inflated Poisson model. Repeatability setting
ICC Zero-Inflated Poisson model. Concordance setting
RQR for NegBin1 GLMM Computes the randomized quantile residuals for Ne...
RQR for NegBin2 GLMM Computes the randomized quantile residuals for Ne...
RQR for Poisson GLMM Computes the randomized quantile residuals for Po...
RQR for ZINB1 GLMM Computes the randomized quantile residuals for ZINB...
RQR for ZINB2 GLMM Computes the randomized quantile residuals for ZINB...
RQR for ZIP GLMM Computes the randomized quantile residuals for ZIP GL...
RQR for GLMM Computes the randomized quantile residuals for GLMM
ICC standard error for Negative Binomial with additive extradispersion...
ICC standard error for Negative Binomial with a additive extradispersi...
ICC standard error for Negative Binomial with proportional extradisper...
ICC standard error for Negative Binomial with proportional extradisper...
ICC standard error for Poisson model. Repeatability setting
ICC standard error for Poisson model. Concordance setting
ICC standard error for Zero-Inflated Negative Binomial with additive e...
ICC standard error for Zero-Inflated Negative Binomial with a additive...
ICC standard error for Zero-Inflated Negative Binomial with proportion...
ICC standard error for Zero-Inflated Negative Binomial with proportion...
ICC standard error for Zero-Inflated Poisson model. Repeatability sett...
ICC standard error for Zero-Inflated Poisson model. Concordance settin...
GLMM variance components
Zero-Inflation test for GLMM
Estimates the intraclass correlation coefficient (ICC) for count data to assess repeatability (intra-methods concordance) and concordance (between-method concordance). In the concordance setting, the ICC is equivalent to the concordance correlation coefficient estimated by variance components. The ICC is estimated using the estimates from generalized linear mixed models. The within-subjects distributions considered are: Poisson; Negative Binomial with additive and proportional extradispersion; Zero-Inflated Poisson; and Zero-Inflated Negative Binomial with additive and proportional extradispersion. The statistical methodology used to estimate the ICC with count data can be found in Carrasco (2010) <doi:10.1111/j.1541-0420.2009.01335.x>.