Data Handling and Analysis in Macroecology
Add polygon coverage to a PresenceAbscence object
Add variables (in raster format) to a PresenceAbscence object
Frequency distribution of a variable within a species' range
Compute correlogram based on the Moran's I index
Compute a geographic distance matrix
Create species' values based on the species co-occurrence within focal...
Fits a grid into a PresenceAbsence object
Download species' habitat information from the IUCN RedList online dat...
Download species' temporal trend in conservation status from the IUCN ...
Download species' information from the IUCN RedList online database (N...
Transform IUCN RedList conservation status to continuous values
Load a PresenceAbsence object
Create a matrix summarizing species' attributes within cells of a Pres...
Compute the midpoint of species' geographic ranges
Compute pairwise species' geographic overlaps
Crop a PresenceAbsence object based on an input shapefile
Create a presence-absence matrix of species' geographic ranges within ...
Create a presence-absence matrix of species' geographic ranges within ...
Create a presence-absence matrix based on species' point occurrences
Create a presence-absence matrix of species' geographic ranges within ...
Compute species' geographic range sizes
Save a PresenceAbsence object
Filter species' shapefiles based on its presence, origin, and season
Subset a PresenceAbsence object based on species names
Summarize variable(s) values in a presence-absence matrix within speci...
Transform values of a vector
Tools for Data Handling and Analysis in Macroecology.
Plot an object of class PresenceAbsence
PresenceAbsence Class
Print for object of class PresenceAbsence
Print summary for object of class PresenceAbsence
Summary for object of class PresenceAbsence
Handling, processing, and analyzing geographic data on species' distributions and environmental variables. Read Vilela & Villalobos (2015) <doi:10.1111/2041-210X.12401> for details.
Useful links