mgc2.0.2 package

Multiscale Graph Correlation

ConnCompLabel

Connected Components Labelling -- Unique Patch Labelling

discr.mnr

Discriminability Mean Normalized Rank

discr.rdf

Reliability Density Function

discr.sims.cross

Discriminability Cross Simulation

discr.sims.exp

Discriminability Exponential Simulation

discr.sims.fat_tails

Discriminability Spread Simulation

discr.sims.linear

Discriminability Linear Simulation

discr.sims.radial

Discriminability Radial Simulation

discr.stat

Discriminability Statistic

discr.test.one_sample

Discriminability One Sample Permutation Test

discr.test.two_sample

Discriminability Two Sample Permutation Test

discr.validator

Discriminability Utility Validator

DistCentering

An auxiliary function that properly transforms the distance matrix X

DistRanks

An auxiliary function that sorts the entries within each column by asc...

gen.coefs

A helper function to generate a d-dimensional linear transformation ma...

gen.sample.labels

A helper function for simulating sample labels

gen.x.unif

A helper function to generate n samples of a d-dimensional uniform vec...

LocalCov

An auxiliary function that computes all local correlations simultaneou...

mgc.dist.validator

Distance Matrix Validator

mgc.dist.xfm

MGC Distance Transform

mgc.distance

Distance

mgc.ksample

MGC K Sample Testing

mgc.localcorr.driver

Driver for MGC Local Correlations

mgc.localcorr

MGC Local Correlations

mgc.sims.2ball

Sample from Unit 2-Ball

mgc.sims.2sphere

Sample from Unit 2-Sphere

mgc.sims.cubic

Cubic Simulation

mgc.sims.exp

Exponential Simulation

mgc.sims.joint

Joint Normal Simulation

mgc.sims.linear

Linear Simulation

mgc.sims.quad

Quadratic Simulation

mgc.sims.random_rotate

Random Rotation

mgc.sims.rotation

Sample Random Rotation

mgc.sims.sim_gmm

GMM Simulate

mgc.sims.spiral

Spiral Simulation

mgc.sims.step

Step Function Simulation

mgc.sims.ubern

Uncorrelated Bernoulli Simulation

mgc.sims.wshape

W Shaped Simulation

mgc.stat.driver

MGC Sample Statistic Internal Driver

mgc.stat

MGC Test

mgc.test

MGC Permutation Test

mgc.validator

MGC Utility Validator

remove.isolates

Remove Isolates

Smoothing

An auxiliary function that finds the smoothed maximal within the signi...

Thresholding

An auxiliary function that finds a region of significance in the local...

Multiscale Graph Correlation (MGC) is a framework developed by Vogelstein et al. (2019) <DOI:10.7554/eLife.41690> that extends global correlation procedures to be multiscale; consequently, MGC tests typically require far fewer samples than existing methods for a wide variety of dependence structures and dimensionalities, while maintaining computational efficiency. Moreover, MGC provides a simple and elegant multiscale characterization of the potentially complex latent geometry underlying the relationship.