getStrainPHcorners function

get stochastically generated pH corners for each strain

Returns the values of the pH values of the limit function i.e. where the limit is c(0,1,1,0) Reads these in from the microbe group dataframes

getStrainPHcorners(
  microbeNames,
  allStrainNames,
  numStrains,
  pHcorners,
  pHLimit,
  strainOptions,
  oneStrainRandomParams
)

Arguments

• microbeNames: (vector of strings). Names of microbes in the system
• allStrainNames: (vector of strings)
• numStrains: Integer or named vector of integers
• pHcorners: vector of 4 scalars definining the pH lim func
• pHLimit: (logical) Is microbial growth affected by pH?
• strainOptions: list from microPopModel inputs
• oneStrainRandomParams: logical from microPopModel inputs

Returns

(matrix) values of the pH values of the limit function i.e. where the limit is c(0,1,1,0) for each strain