makeParamMatrixG function

generic function which assigns values for Rtype or stoichiom to an array of the same name array has form [group,resource,path] reads in data from MFG dataframes

makeParamMatrixG(
  microbeNames,
  parameterName,
  numPaths,
  resData,
  microbeMolarMass,
  resNames
)

Arguments

• microbeNames: Vector of strings which contains the names of the microbial groups in the system e.g. c('Bacteroides','Acetogens')
• parameterName: Name of parameter (Rtype and stoichiom)
• numPaths: Named vector. Number of paths for each microbial group
• resData: sys info dataframe for resources
• microbeMolarMass: Scalar. Molar mass of microbe e.g. 113g/mol
• resNames: Vector of strings which contains the names of the resources in the system

Returns

array of form: parameterName [gname,rname,pname]