quickPlot function

Generic plotting showing results of microPop

quickPlot(
  soln,
  numR,
  numStrains,
  microbeNames,
  yLabel,
  xLabel,
  sumOverStrains,
  resourceLegendPosition = "topleft",
  microbeLegendPosition = "topleft",
  saveFig = FALSE,
  figType = "eps",
  figName = "microPopFig"
)

Arguments

• soln: ODE output from microPopModel() i.e. matrix out$solution
• numR: Scalar. Number of resources
• numStrains: Scalar. Number of strains per group
• microbeNames: Vector of strings which contains the names of the microbial groups in the system e.g. c('Bacteroides','Acetogens')
• yLabel: String for y axis label
• xLabel: String for x axis label
• sumOverStrains: Logical
• resourceLegendPosition: String. Position of legend in resource plot, default is 'topleft'
• microbeLegendPosition: String. Position of legend in microbe plot, default is 'topleft'
• saveFig: Logical. Default is FALSE
• figType: String. Default is "eps"
• figName: String. Default is "microPopFig"

Returns

Nothing just generates a plot