Methods for Taxonomic Classification of Prokaryotes
Classifying using BLAST
Building a BLAST database
K-mer counting
Methods for 16S based taxonomic classification of prokaryotes
Classifying with a Multinomial model
Training multinomial model
Classifying with the RDP classifier
Training the RDP classifier
Set number of parallel threads
Classifying 16S sequences
Functions for assigning 16S sequence data to a taxonomic level in the tree-of-life for prokaryotes.