missingHE1.5.0 package

Missing Outcome Data in Health Economic Evaluation

anyBars

An internal function to detect the random effects component from an ob...

coef.missingHE

Extract regression coefficient estimates from objects in the class `mi...

data_read_hurdle

A function to read and re-arrange the data in different ways for the h...

data_read_pattern

A function to read and re-arrange the data in different ways

data_read_selection

A function to read and re-arrange the data in different ways

data_read_selection_long

A function to read and re-arrange the data in different ways

diagnostic

Diagnostic checks for assessing MCMC convergence of Bayesian models fi...

fb

An internal function to extract the random effects component from an o...

hurdle

Full Bayesian Models to handle missingness in Economic Evaluations (Hu...

isAnyArgBar

An internal function to detect the random effects component from an ob...

isBar

An internal function to detect the random effects component from an ob...

jagsresults

An internal function to summarise results from BUGS model

nobars_

An internal function to separate the fixed and random effects componen...

pattern

Full Bayesian Models to handle missingness in Economic Evaluations (Pa...

pic

Predictive information criteria for Bayesian models fitted in JAGS u...

plot.missingHE

Plot method for the imputed data contained in the objects of class `mi...

ppc

Posterior predictive checks for assessing the fit to the observed data...

print.missingHE

Print method for the posterior results contained in the objects of cla...

prior_hurdle

An internal function to change the hyperprior parameters in the hurdle...

prior_pattern

An internal function to change the hyperprior parameters in the select...

prior_selection

An internal function to change the hyperprior parameters in the select...

prior_selection_long

An internal function to change the hyperprior parameters in the select...

run_hurdle

An internal function to execute a JAGS hurdle model and get posterior ...

run_pattern

An internal function to execute a JAGS pattern mixture model and get p...

run_selection

An internal function to execute a JAGS selection model and get posteri...

run_selection_long

An internal function to execute a JAGS selection model and get posteri...

selection

Full Bayesian Models to handle missingness in Economic Evaluations (Se...

selection_long

Full Bayesian Models to handle missingness in Economic Evaluations (Se...

summary.missingHE

Summary method for objects in the class missingHE

write_hurdle

An internal function to select which type of hurdle model to execute f...

write_pattern

An internal function to select which type of pattern mixture model to ...

write_selection

An internal function to select which type of selection model to execut...

write_selection_long

An internal function to select which type of selection model to execut...

Contains a suite of functions for health economic evaluations with missing outcome data. The package can fit different types of statistical models under a fully Bayesian approach using the software 'JAGS' (which should be installed locally and which is loaded in 'missingHE' via the 'R' package 'R2jags'). Three classes of models can be fitted under a variety of missing data assumptions: selection models, pattern mixture models and hurdle models. In addition to model fitting, 'missingHE' provides a set of specialised functions to assess model convergence and fit, and to summarise the statistical and economic results using different types of measures and graphs. The methods implemented are described in Mason (2018) <doi:10.1002/hec.3793>, Molenberghs (2000) <doi:10.1007/978-1-4419-0300-6_18> and Gabrio (2019) <doi:10.1002/sim.8045>.

  • Maintainer: Andrea Gabrio
  • License: GPL-2
  • Last published: 2023-03-21