Unified Multiple Testing Procedures
Lowest Slope Line (LSL) method of Hochberg and Benjamini for estimatin...
Benjamini-Hochberg (2000) adaptive linear step-up procedure
Storey-Taylor-Siegmund (2004) adaptive step-up procedure
A function plotting adjusted p-values...
Step-up-down test based on the asymptotically optimal rejection curve.
Wrapper function to the augmentation methods of the multtest package.
Benjamini-Hochberg (1995) linear step-up procedure
Benjamini-Liu (1999) step-down procedure
Blanchard-Roquain (2008) step-up Procedure for arbitrary dependent p-V...
Bonferroni correction...
Estimate of pi0 using the one-step Blanchard-Roquain procedure
Benjamini-Yekutieli (2001) step-up procedure
Calculating the beta adjustment factor for the asymptotically optimal ...
Functions for comparing outputs of different procedures.
Class ErrorControl
Fisher (2x2) table association analysis for calculating one (marginal)...
Fisher (2x2) table association analysis for calculating all marginal p...
Fisher-type (2x3) table association analysis for calculating one (marg...
Fisher-type (2x3) table association analysis for calculating all margi...
Marginal F test
Xin Gao's non-parametric multiple test procedure is applied to Data.
Extracts the parameters from the simulation()-Object
Gathering statistics from simulation()-Object
Hochberg (1988) step-up procedure
Holm's (1979) step-down-procedure
Hommel's (1988) step-up-procedure
Blanchard-Roquain (2009) 1-stage adaptive step-up
Joint cumulative distribution function of order statistics of n iid. U...
Linear Step Up Service Function...
Test for compatible classes for comparison...
Tests if all hypotheses have the same names.
Tests that different procedures used the same error rates.
Tests if the same pvalues were used by different procedures.
Tests that different procedures use the same error types.
Simultaneous confidence intervals for arbitrary parametric contrasts i...
A service function used by multiple...
Benjamini-Krieger-Yekutieli (2006) Multi-Stage Step-Down
Applies a function to a Mutoss object.
Mutoss Models
mutoss.plotCI
Class Mutoss
Class MutossMethod
Simultaneous confidence intervals for relative contrast effects...
Simultaneous confidence intervals for relative contrast effects...
Marginal one sample test
Bejamini-Hochberg (2000) oracle linear step-up Procedure...
Marginal paired two sample test
Internal MuTossProjekt-Function
Strimmer et al.'s fdrtool-based local fdr
Strimmer et al.'s fdrtool-based q-values
A function plotting p-values...
Storey's (2001) q-value Procedure...
Rank truncated p-Value procedure...
REGWQ - Ryan / Einot and Gabriel / Welsch test procedure...
reject
Tries to load a package.
Rom's (1990) step-up-procedure.
A general step-down procedure.
Sidak correction
Sidak-like (1987) step-down procedure
Simulation studies
Student - Newman - Keuls rejective test procedure.
Storey-Taylor-Siegmund estimation of pi0 (finite sample version)
A general step-up procedure.
A general step-up-down procedure.
Two-step estimation method of Benjamini, Krieger and Yekutieli for est...
Tukey HSD test and simultaneous confidence intervals for all pairs com...
A p-value procedure which controls the FDR for independent test statis...
Marginal two sample test
Blanchard-Roquain (2009) 2-stage adaptive step-up...
Designed to ease the application and comparison of multiple hypothesis testing procedures for FWER, gFWER, FDR and FDX. Methods are standardized and usable by the accompanying 'mutossGUI'.