Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
Multivariate Brownian Motion models of continuous traits evolution
Multivariate Early Burst model of continuous traits evolution
Discriminant Function Analysis (DFA) - also called Linear Discriminant...
Principal Component Analysis (PCA) based on GLS (or OLS) estimate of t...
Fit linear model using Generalized Least Squares to multivariate (high...
Multivariate (and univariate) algorithms for log-likelihood estimation...
Extract gls (or ols) model residuals
Akaike weights
Estimation of traits ancestral states.
Extract multivariate gls (or ols) model coefficients
Projection of 2D and 3D shapes (from geometric morphometric datasets) ...
Multivariate measure of association/effect size for objects of class "...
Extended Information Criterion (EIC) to compare models fit with `mvgls...
Ancestral states reconstructions and missing value imputation with phy...
Extract multivariate gls (or ols) model fitted values
Generalized Information Criterion (GIC) to compare models fit with `mv...
The phylogenetic half-life for an Ornstein-Uhlenbeck process
Likelihood Ratio Test
Multivariate Analysis of Variance
Model parameterization for the various mvMORPH functions
Multivariate Comparative Methods for Fitting Evolutionary Models to Mo...
Fit linear model using Ordinary Least Squares to multivariate (high-di...
Multivariate Ornstein-Uhlenbeck model of continuous traits evolution
Multivariate continuous trait evolution for a stationary time series (...
Quantile-Quantile plots for multivariate models fit with mvgls or `m...
Multivariate Brownian motion / Random Walk model of continuous traits ...
Multivariate change in mode of continuous trait evolution
Simulation of (multivariate) continuous traits on a phylogeny
Pairwise contrasts
Pairwise multivariate tests between levels of a factor
Projection of 2D and 3D shapes (from geometric morphometric datasets) ...
Predictions from Discriminant analysis conducted with a mvgls model fi...
Predictions from (multivariate) gls or ols model fit
Pruning algorithm to compute the square root of the phylogenetic covar...
The stationary variance of an Ornstein-Uhlenbeck process
Calculate variance-covariance matrix for a fitted object of class 'mvg...
Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees and time series. 'mvMORPH' also proposes high-dimensional multivariate comparative tools (linear models using Generalized Least Squares and multivariate tests) based on penalized likelihood. See Clavel et al. (2015) <DOI:10.1111/2041-210X.12420>, Clavel et al. (2019) <DOI:10.1093/sysbio/syy045>, and Clavel & Morlon (2020) <DOI:10.1093/sysbio/syaa010>.