neotoma21.0.8 package

Obtain data citations from multiple records.

Generate a data citation from a Neotoma2 object.

Apply a filter for Neotoma sites objects.

Get contact information for Neotoma contributors

get_datasets

get_documentation

get_downloads

get_manual

get_params

Get publication information for Neotoma records

get_sites

get_speleothems

An S4 class for Neotoma publications.

S4 class for repository information

S4 class for samples information

samples

Obtain samples from a record or multiple records.

Create a new publication (or publication set)

set Sample Information

Set Neotoma API Source or Server

sub-sub

sub-subset

sub

subset

Summary of objects within a sites object.

S4 class for taxa information

Extract taxonomic data from a set of sites.

taxa

toWide

Plot site coordinates using a basic plot.

plotLeaflet

plotLeaflet

Recover information about the chron controls for a collectionunit.

Recover information about the chron controls for a collectionunit.

chroncontrols

S4 class for chronologies information

Extract chronologies from a sites or collunits object.

Obtain the chronology from a record or multiple records.

Check contact information for a record against Neotoma contributors

Add a new chronology into an existing collectionunit.

as.data.frame

An S4 class for the authors of a Neotoma publication.

c - Combine neotoma2 objects

cash-set

cash

clean Neotoma objects to remove duplicates and empty objects.

S4 class for collection units information.

Extract collunits from a sites object.

Extract collection units from a sites object

An S4 class for multi-contact information from the Neotoma Paleoecolog...

Return the latitude and longitude of sites

Obtain coordinates from a sites object.

S4 class for datasets information

Extract datasets from a sites or collunits object.

Extract datasets from a sites object.

Obtain dataset DOIs from records.

Obtain the DOI for publications or datasets.

pingNeotoma

get_stats

Get table record from Neotoma

get_taxa

get_taxon

Get object IDs

length

c Method - Combine objects, including NULL

Get a neotoma2 object's slot names

Pipe operator See magrittr::%>% for details.

set chronology information for a new record.

set Site Information for Fossil Sites

Set contact information for a new record.

set Site Information for Fossil Sites

Change the default age model for a record.

Set the default chronology within a collectionunit.

set Site Information for Fossil Sites

Set Speleothem

Display a sites object or nested slots.

An S4 class for sites information

S4 class for specimens information

speleothemdetails

Obtain speleothems and samples from a record or multiple records.

S4 class for speleothem information

speleothems

Obtain speleothems from a record or multiple records.