nlmixr23.0.1 package

Nonlinear Mixed Effects Models in Population PK/PD

addCwres

Add CWRES

addNpde

NPDE calculation for nlmixr2

addTable

Add table information to nlmixr2 fit object without tables

bobyqaControl

Control for bobyqa estimation method in nlmixr2

bootplot

Produce delta objective function for boostrap

bootstrapFit

Bootstrap nlmixr2 fit

foceiControl

Control Options for FOCEi

lbfgsb3cControl

Control for lbfgsb3c estimation method in nlmixr2

n1qn1Control

Control for n1qn1 estimation method in nlmixr2

newuoaControl

Control for newuoa estimation method in nlmixr2

nlmControl

nlmixr2 defaults controls for nlm

nlmeControl

Control Values for nlme Fit with extra options for nlmixr

nlminbControl

nlmixr2 nlminb defaults

nlmixr2

nlmixr2 fits population PK and PKPD non-linear mixed effects models.

nlmixr2CheckInstall

Check your nlmixr2 installation for potential issues

nlsControl

nlmixr2 defaults controls for nls

optimControl

nlmixr2 optim defaults

preconditionFit

Linearly re-parameterize the model to be less sensitive to rounding er...

profileFixed

Estimate the objective function values for a model while fixing define...

profileFixedSingle

Estimate the objective function values for a model while fixing define...

profileLlp

Profile confidence intervals with log-likelihood profiling

reexports

Objects exported from other packages

saemControl

Control Options for SAEM

setOfv

Set/get Objective function type for a nlmixr2 object

tableControl

Output table/data.frame options

traceplot

Produce trace-plot for fit if applicable

uobyqaControl

Control for uobyqa estimation method in nlmixr2

vpcCens

VPC based on ui model

vpcCensTad

VPC based on ui model

vpcPlot

VPC based on ui model

vpcPlotTad

VPC based on ui model

vpcSim

VPC simulation

Fit and compare nonlinear mixed-effects models in differential equations with flexible dosing information commonly seen in pharmacokinetics and pharmacodynamics (Almquist, Leander, and Jirstrand 2015 <doi:10.1007/s10928-015-9409-1>). Differential equation solving is by compiled C code provided in the 'rxode2' package (Wang, Hallow, and James 2015 <doi:10.1002/psp4.12052>).

  • Maintainer: Matthew Fidler
  • License: GPL (>= 3)
  • Last published: 2024-10-28