ohvbd1.0.0 package

Generate a base request string for the AREAdata database

Associate other data sources with AREAdata data

Associate other data sources with gadm IDs

Check whether databases are currently online

Print current ohvbd configuration variables

Check whether an object is from a given database and complete appropri...

Delete all rda files from ohvbd AREAdata cache (Deprecated)

Delete files from ohvbd cache directories

Try to coerce a date even when bits are missing

Convert a vector of place names to their equivalent at a different gid...

Reimplementation of cli's default progress style

Format directory as df ready for tree plotting

Extract request ids from httr2 response objects

Fuzzy match a term (case-insensitive) to a list of final terms through...

Extract specified data from a set of responses (Deprecated)

Fetch AREAdata dataset

Retrieve citations for vecdyn data

Retrieve citations for vectraits data

Try to find the relevant citations for a dataset

Fetch gadm mapping shapefiles

Fetch GBIF dataset/s by ID

Fetch and parse multiple VecDyn datasets by ID in chunks

Get and parse multiple VecTraits datasets by ID in chunks

Fetch VecDyn dataset length by ID

Fetch VecDyn metadata table

Fetch VecDyn dataset/s by ID

Fetch VecTraits dataset/s by ID

Fetch specified data from a set of ids

Filter hub search results by database

Find the ids of any resps that contain 404 errors from a list of them

Get current columns in VecDyn datasets

Get current IDs in VecDyn

Find the ids of any resps that contain a count of 0 list of them

Get current IDs in VecTraits

Force an object to appear to come from a specific database

Force a polygon WKT into multipolygon form

Format and print date overlaps

Generate a vectraits template from a short set of survey responses

Extract curl errors from httr2 error objects

Get ohvbd cache locations

Extract data from AREAdata datasets

Parse data from requests to GBIF

Parse data from requests to VecDyn

Parse data from requests to VecTraits

Extract specified data from a set of responses

Test whether an object has provenance information

Check whether an object has been loaded from cache by ohvbd

Test whether an object is considered to be from a particular database

List all ohvbd cached files

Match country names to their equivalent naturalearth WKT polygons

Match species names to their GBIF backbone ids

Internal attributes

Database provenance

Option: dry runs of ohvbd searches

ohvbd: One Health VBD Hub

Create a new ohvbd ID vector

Reimplementation of cli's progress style shim

Read AREAdata from cache file

Search vbdhub.org

Search VecDyn using the explorer's filters

Search VecDyn by keyword

Search VecTraits using the explorer's filters

Search VecTraits by keyword

Set the default ohvbd cache location

Set ohvbd compatability mode to TRUE

collapse a list of character strings to a JS space-separated single st...

Encode spatvector as WKT, and convert to multipolygon if needed

Tee a pipeline to extract the data at a given point

Generate a base request object for the vectorbyte databases

Retrieve and format error message from failed vd calls

Extract a single vd response, including consistent data

Create a query for a given VD id at a given page

Retrieve and format error message from failed vt calls

wkt_to_multipolygon

write data from AREAdata to cache file