Interactive Annotation of Characters with Biological Ontologies
Annotate all character statements with ontology terms
Annotate a character statement with ontology terms
Get number of chracters per each ontology term
Convert edge matrix to list
Export annotation data
Export to Cytoscape format
Get ancestal ontology terms for a set of characters
Get characters that descendants of selected ontology term
Get IDs for ontology names
Get names for ontology IDs
Convert list to edge matrix
Make an ontology object for visualization
Shortcut to process characters and ontology
Return ontology paths for characters
Run ontoFAST interactively
Link synonyms with ontology terms
Converts a table to list
Tools for annotating characters (character matrices) with anatomical and phenotype ontologies. Includes functions for visualising character annotations and creating simple queries using ontological relationships.