healthlake function

Amazon HealthLake

AWS HealthLake is a HIPAA eligibile service that allows customers to store, transform, query, and analyze their FHIR-formatted data in a consistent fashion in the cloud.

healthlake(
  config = list(),
  credentials = list(),
  endpoint = NULL,
  region = NULL
)

Arguments

• config: Optional configuration of credentials, endpoint, and/or region.

  • credentials :

    • creds :

      • access_key_id : AWS access key ID
      • secret_access_key : AWS secret access key
      • session_token : AWS temporary session token

    • profile : The name of a profile to use. If not given, then the default profile is used.

    • anonymous : Set anonymous credentials.

  • endpoint : The complete URL to use for the constructed client.

  • region : The AWS Region used in instantiating the client.

  • close_connection : Immediately close all HTTP connections.

  • timeout : The time in seconds till a timeout exception is thrown when attempting to make a connection. The default is 60 seconds.

  • s3_force_path_style : Set this to true to force the request to use path-style addressing, i.e. http://s3.amazonaws.com/BUCKET/KEY.

  • sts_regional_endpoint : Set sts regional endpoint resolver to regional or legacy https://docs.aws.amazon.com/sdkref/latest/guide/feature-sts-regionalized-endpoints.html

• credentials: Optional credentials shorthand for the config parameter

  • creds :

    • access_key_id : AWS access key ID
    • secret_access_key : AWS secret access key
    • session_token : AWS temporary session token

  • profile : The name of a profile to use. If not given, then the default profile is used.

  • anonymous : Set anonymous credentials.

• endpoint: Optional shorthand for complete URL to use for the constructed client.

• region: Optional shorthand for AWS Region used in instantiating the client.

Returns

A client for the service. You can call the service's operations using syntax like svc$operation(...), where svc is the name you've assigned to the client. The available operations are listed in the Operations section.

Service syntax

svc <- healthlake(
  config = list(
    credentials = list(
 creds = list(
   access_key_id = "string",
   secret_access_key = "string",
   session_token = "string"
 ),
 profile = "string",
 anonymous = "logical"
    ),
    endpoint = "string",
    region = "string",
    close_connection = "logical",
    timeout = "numeric",
    s3_force_path_style = "logical",
    sts_regional_endpoint = "string"
  ),
  credentials = list(
    creds = list(
 access_key_id = "string",
 secret_access_key = "string",
 session_token = "string"
    ),
    profile = "string",
    anonymous = "logical"
  ),
  endpoint = "string",
  region = "string"
)

Operations

create_fhir_datastore	Creates a data store that can ingest and export FHIR formatted data
delete_fhir_datastore	Deletes a data store
describe_fhir_datastore	Gets the properties associated with the FHIR data store, including the data store ID, data store ARN, data store name, data store status, when the data store was created, data store type version, and the data store's endpoint
describe_fhir_export_job	Displays the properties of a FHIR export job, including the ID, ARN, name, and the status of the job
describe_fhir_import_job	Displays the properties of a FHIR import job, including the ID, ARN, name, and the status of the job
list_fhir_datastores	Lists all FHIR data stores that are in the user’s account, regardless of data store status
list_fhir_export_jobs	Lists all FHIR export jobs associated with an account and their statuses
list_fhir_import_jobs	Lists all FHIR import jobs associated with an account and their statuses
list_tags_for_resource	Returns a list of all existing tags associated with a data store
start_fhir_export_job	Begins a FHIR export job
start_fhir_import_job	Begins a FHIR Import job
tag_resource	Adds a user specified key and value tag to a data store
untag_resource	Removes tags from a data store

Examples

## Not run:

svc <- healthlake()
svc$create_fhir_datastore(
  Foo = 123
)
## End(Not run)