permutePval function

Permutation p-value

Computes a p-value using a permutation procedure.

permutePval(pcevObj, ...)

## Default S3 method:
permutePval(pcevObj, ...)

## S3 method for class 'PcevClassical'
permutePval(pcevObj, shrink, index, nperm, ...)

## S3 method for class 'PcevBlock'
permutePval(pcevObj, shrink, index, nperm, ...)

## S3 method for class 'PcevSingular'
permutePval(pcevObj, shrink, index, nperm, ...)

Arguments

• pcevObj: A pcev object of class PcevClassical or PcevSingular

  PcevBlock

• ...: Extra parameters.

• shrink: Should we use a shrinkage estimate of the residual variance?

• index: If pcevObj is of class PcevBlock, index is a vector describing the block to which individual response variables correspond.

• nperm: The number of permutations to perform.