run_iovsearch function

run_iovsearch

Run IOVsearch tool. For more details, see :ref:iovsearch.

run_iovsearch(
  column = "OCC",
  list_of_parameters = NULL,
  rank_type = "bic",
  cutoff = NULL,
  distribution = "same-as-iiv",
  results = NULL,
  model = NULL,
  strictness = "minimization_successful or (rounding_errors and sigdigs>=0.1)",
  E = NULL,
  ...
)

Arguments

• column: (str) Name of column in dataset to use as occasion column (default is 'OCC')
• list_of_parameters: (array(str or array(str)) (optional)) List of parameters to test IOV on, if none all parameters with IIV will be tested (default)
• rank_type: (str) Which ranking type should be used. Default is BIC.
• cutoff: (numeric (optional)) Cutoff for which value of the ranking type that is considered significant. Default is NULL (all models will be ranked)
• distribution: (str) Which distribution added IOVs should have (default is same-as-iiv)
• results: (ModelfitResults (optional)) Results for model
• model: (Model (optional)) Pharmpy model
• strictness: (str (optional)) Strictness criteria
• E: (numeric or str (optional)) Expected number of predictors (used for mBIC). Must be set when using mBI
• ...: Arguments to pass to tool

Returns

(IOVSearchResults) IOVSearch tool result object

Examples

## Not run:

model <- load_example_model("pheno")
results <- load_example_modelfit_results("pheno")
run_iovsearch('OCC', results=results, model=model)
## End(Not run)