plsRglm1.5.1 package

Partial Least Squares Regression for Generalized Linear Models

summary.plsRglmmodel

Summary method for plsRglm models

summary.plsRmodel

Summary method for plsR models

tilt.bootpls

Non-parametric tilted bootstrap for PLS regression models

tilt.bootplsglm

Non-parametric tilted bootstrap for PLS generalized linear regression ...

summary.cv.plsRglmmodel

Summary method for plsRglm models

summary.cv.plsRmodel

Summary method for plsR models

aic.dof

Akaike and Bayesian Information Criteria and Generalized minimum descr...

AICpls

AIC function for plsR models

bootpls

Non-parametric Bootstrap for PLS models

bootplsglm

Non-parametric Bootstrap for PLS generalized linear models

boxplots.bootpls

Boxplot bootstrap distributions

coef.plsRglmmodel

coef method for plsR models

coef.plsRmodel

coef method for plsR models

coefs.plsR.raw

Raw coefficients for bootstrap computations of PLSR models

coefs.plsR

Coefficients for bootstrap computations of PLSR models

coefs.plsRglm.raw

Raw coefficients for bootstrap computations of PLSGLR models

coefs.plsRglm

Coefficients for bootstrap computations of PLSGLR models

coefs.plsRglmnp

Coefficients for bootstrap computations of PLSGLR models

coefs.plsRnp

Coefficients for bootstrap computations of PLSR models

confints.bootpls

Bootstrap confidence intervals

cv.plsR

Partial least squares regression models with k-fold cross-validation

cv.plsRglm

Partial least squares regression glm models with k-fold cross validati...

cvtable

Table method for summary of cross validated PLSR and PLSGLR models

dicho

Dichotomization

infcrit.dof

Information criteria

kfolds2Chisq

Computes Predicted Chisquare for k-fold cross-validated partial least ...

kfolds2Chisqind

Computes individual Predicted Chisquare for k-fold cross validated par...

kfolds2coeff

Extracts coefficients from k-fold cross validated partial least square...

kfolds2CVinfos_glm

Extracts and computes information criteria and fits statistics for k-f...

kfolds2CVinfos_lm

Extracts and computes information criteria and fits statistics for k-f...

kfolds2Mclassed

Number of missclassified individuals for k-fold cross validated partia...

kfolds2Mclassedind

Number of missclassified individuals per group for k-fold cross valida...

kfolds2Press

Computes PRESS for k-fold cross validated partial least squares regres...

kfolds2Pressind

Computes individual PRESS for k-fold cross validated partial least squ...

loglikpls

loglikelihood function for plsR models

permcoefs.plsR.raw

Raw coefficients for permutation bootstrap computations of PLSR models

permcoefs.plsR

Coefficients for permutation bootstrap computations of PLSR models

permcoefs.plsRglm.raw

Raw coefficients for permutation bootstrap computations of PLSGLR mode...

permcoefs.plsRglm

Coefficients for permutation bootstrap computations of PLSGLR models

permcoefs.plsRglmnp

Coefficients for permutation bootstrap computations of PLSGLR models

permcoefs.plsRnp

Coefficients computation for permutation bootstrap

plot.table.summary.cv.plsRglmmodel

Plot method for table of summary of cross validated plsRglm models

plot.table.summary.cv.plsRmodel

Plot method for table of summary of cross validated plsR models

plots.confints.bootpls

Plot bootstrap confidence intervals

PLS_glm_wvc

Light version of PLS_glm for cross validation purposes

PLS_lm_wvc

Light version of PLS_lm for cross validation purposes

plsR.dof

Computation of the Degrees of Freedom

plsR

Partial least squares Regression models with leave one out cross valid...

plsRglm-package

plsRglm-package

plsRglm

Partial least squares Regression generalized linear models

predict.plsRglmmodel

Print method for plsRglm models

predict.plsRmodel

Print method for plsR models

print.coef.plsRglmmodel

Print method for plsRglm models

print.coef.plsRmodel

Print method for plsR models

print.cv.plsRglmmodel

Print method for plsRglm models

print.cv.plsRmodel

Print method for plsR models

print.plsRglmmodel

Print method for plsRglm models

print.plsRmodel

Print method for plsR models

print.summary.plsRglmmodel

Print method for summaries of plsRglm models

print.summary.plsRmodel

Print method for summaries of plsR models

signpred

Graphical assessment of the stability of selected variables

simul_data_complete

Data generating detailed process for multivariate plsR models

simul_data_UniYX

Data generating function for univariate plsR models

simul_data_UniYX_binom

Data generating function for univariate binomial plsR models

simul_data_YX

Data generating function for multivariate plsR models

Provides (weighted) Partial least squares Regression for generalized linear models and repeated k-fold cross-validation of such models using various criteria <arXiv:1810.01005>. It allows for missing data in the explanatory variables. Bootstrap confidence intervals constructions are also available.

  • Maintainer: Frederic Bertrand
  • License: GPL-3
  • Last published: 2023-03-14