plot.sum_cmspans function

Plot Summary Stats for a Summary of a cmspans Object

Plots a heat map of summary statistics for sum_cmspans objects (the object produced by calling summary on a cmspans object).

## S3 method for class 'sum_cmspans'
plot(
  x,
  digits = 3,
  sep = ".",
  name.sep = "&",
  values = TRUE,
  high = "red",
  transpose = TRUE,
  plot = TRUE,
  facet.vars = "time",
  rev.codes = !transpose,
  rev.stats = !transpose,
  ...
)

Arguments

• x: The sum_cmspans object (the object produced by calling summary on a cmspans object)
• digits: The number of digits displayed if values is TRUE.
• sep: The character that was used in paste2 to paste the columns.
• name.sep: The character that was used to paste the column names.
• values: logical. If TRUE the cell values will be included on the heatmap.
• high: The color to be used for higher values.
• transpose: logical. If TRUE the dataframe is rotated 90 degrees.
• plot: logical. If TRUE the plot will automatically plot. The user may wish to set to FALSE for use in knitr, sweave, etc. to add additional plot layers.
• facet.vars: A character vector of names to facet by. Default is "time".
• rev.codes: logical If TRUE the plotting order of the code groups is reversed.
• rev.stats: logical If TRUE the plotting order of the code descriptive statistics is reversed.
• ...: Other arguments passed to qheat.

See Also

summary.cmspans