ridge3.3 package

Ridge Regression with Automatic Selection of the Penalty Parameter

linearRidge

Linear ridge regression.

linearRidgeGenotypes

Fits linear ridge regression models for genome-wide SNP data.

linearRidgeGenotypesPredict

Predict phenotypes from genome-wide SNP data based on a file of coeffi...

logisticRidge

Logistic ridge regression.

logisticRidgeGenotypes

Fits logistic ridge regression models for genomoe-wide SNP data.

logisticRidgeGenotypesPredict

Predict fitted probabilities from genome-wide SNP data based on a file...

pvals

Compute p-values for ridgeLinear and ridgeLogistic models

ridge-internal

Internal functions for logistic ridge regression.

ridge-package

ridge-package description

ridge

ridge: Linear and logistic ridge regression functions.

Download source packageRead PDF manual

Linear and logistic ridge regression functions. Additionally includes special functions for genome-wide single-nucleotide polymorphism (SNP) data. More details can be found in <doi: 10.1002/gepi.21750> and <doi: 10.1186/1471-2105-12-372>.

  • Maintainer: Steffen Moritz
  • License: GPL-2
  • Last published: 2022-04-11

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