riverdist0.17.1 package

River Network Distance Computation and Applications

addcumuldist

Add Cumulative Distance to a River Network

addverts

Add Vertices To Maintain a Minimum Distance Between Vertices

buildlookup

Build Lookup Tables for Fast Distance Computation

buildsegroutes

Build Segment Routes

calculateconnections

Calculate the Connectivity Matrix for a River Network

checkbraided

Check for Braiding in a River Network

checkbraidedTF

Check for Braiding in a River Network

cleanup_verts

Interactive Cleanup of the Vertices of Individual Segments

cleanup

Interactive Cleanup of a River Network

connectsegs

Connect Segments

densityanomaly

Plot Difference from Mean Kernel Density Using River Distance

detectroute

Detect Route

dissolve

Dissolve

highlightseg

Highlight Segments

homerange-class

The "homerange" Class

homerange

Home Range

homerangeoverlap

Home Range Overlap

isflowconnected

Check Flow-Connectedness

kfunc

Plotting K-functions for a Set of Surveys

line2network

Create a River Network Object from a Shapefile

makeriverdensity

Calculate Kernel Density Using River Distance

mapbyname

Map Segments by Name

matbysurveylist

Generate List of Distance Matrix Between Observations, for All Individ...

mouthdist

Distance From Mouth

mouthdistbysurvey

Distance From Mouth for All Observations of Individuals

pdist

Pythagorean Distance

pdisttot

Total Pythagorean Distance

plot.homerange

Plot Home Range

plot.riverdensity

Plot Kernel Density Using River Distance

plot.rivernetwork

Plotting a River Network

plothomerangeoverlap

Plot Home Range Overlap

plotmatbysurveylist

Plot Upstream Distance Between Observations of All Individuals

plotriverdensitypoints

Plot Points Used for Kernel Density

plotseq

Plot Sequence of Observations

pointshp2segvert

Convert a Point Shapefile to River Locations

removeduplicates

Remove Duplicates

removemicrosegs

Remove Segments that are Smaller than the Connectivity Tolerance

removeunconnected

Remove Unconnected Segments

riverdensity

The "riverdensity" Class

riverdirection

River Direction

riverdirectionmat

River Direction Matrix

riverdirectionmatbysurvey

River Direction Matrix of All Observations of an Individual

riverdirectionseq

River Travel Direction Between Sequential Observations

riverdirectiontofrom

River Direction Matrix between Two Datasets

riverdist-package

River Network Distance Computation and Applications

riverdistance

River Distance

riverdistancelist

Multiple River Distances

riverdistancemat

River Distance Matrix

riverdistancematbysurvey

River Distance Matrix of All Observations of an Individual

riverdistanceseq

River Distance Between Sequential Observations

riverdistancetofrom

River Distance Matrix between Two Datasets

rivernetwork

The "rivernetwork" Class

riverpoints

Draw Points from River Locations

routelist

Detect Multiple Routes

segvert2xy

Convert River Locations to XY coordinates

sequenceverts

Store Vertices in Ascending Sequence

setmouth

Specify the Segment and Vertex of the Mouth of a River Network Object.

showends

Identify Vertex Coordinates of Segment Endpoints

splitsegmentat

Split a Segment at a Specified Vertex

splitsegments

Split Segments by Endpoint Proximity

topologydots

Check Connectivity of a River Network Object

trimriver

Trim a River Network Object to Specified Segments

trimtopoints

Trim a River Network to a Set of X-Y Coordinates

upstream

Upstream River Distance

upstreammat

Upstream Distance Matrix

upstreammatbysurvey

Upstream Distance Matrix of All Observations of an Individual

upstreamseq

Upstream Distance Between Sequential Observations

upstreamtofrom

Upstream Distance Matrix between Two Datasets

whoconnected

Check Which Segments are Connected to a Given Segment.

xy2segvert

Convert XY Coordinates to River Locations

zoomtoseg

Zoom to segment

Reads river network shape files and computes network distances. Also included are a variety of computation and graphical tools designed for fisheries telemetry research, such as minimum home range, kernel density estimation, and clustering analysis using empirical k-functions with a bootstrap envelope. Tools are also provided for editing the river networks, meaning there is no reliance on external software.

  • Maintainer: Matt Tyers
  • License: GPL-2
  • Last published: 2024-11-07