rspiro0.5 package

Implementation of Spirometry Equations

getLMS_GLIdiff

Calculate L,M,S of GLI diffusing capacity (2017) equations

getLMS_GLIgl

Calculate L,M,S of race-neutral GLI global (2022) equations

getLMS_JRS

Calculate L,M,S of JRS (Japanese Respiratory Society 2014) equations

getLMS

Calculate L,M,S of GLI-2012

LLN_GLI

Calculate LLN of spirometry parameters using GLI-2012 equations

LLN_GLIdiff

Calculate LLN of diffusing capacity parameters using GLI (2017) equati...

LLN_GLIgl

Calculate LLN of spirometry parameters using GLI global (2022) equatio...

LLN_JRS

Calculate LLN of spirometry parameters using JRS (2014) equations

LLN_NHANES3

Calculate predicted values of spirometry parameters using NHANES III e...

pctpred_GLI

Convert spirometric values to % predicted using GLI-2012 equations

pctpred_GLIdiff

Convert diffusing capacity values to % predicted using GLI (2017) equa...

pctpred_GLIgl

Convert spirometric values to % predicted using GLI global (2022) equa...

pctpred_JRS

Convert spirometric values to % predicted using JRS (2014) equations

pctpred_NHANES3

Convert spirometric values to % predicted using NHANES III equations

pred_GLI

Calculate predicted values of spirometry parameters using GLI-2012 equ...

pred_GLIdiff

Calculate predicted values of diffusing capacity using GLI (2017) equa...

pred_GLIgl

Calculate predicted values of spirometry parameters using GLI global (...

pred_JRS

Calculate predicted values of spirometry parameters using JRS (2014) e...

pred_NHANES3

Calculate predicted values of spirometry parameters using NHANES III e...

raw_GLI

Convert z-scores back to raw spirometric values using GLI-2012 equatio...

raw_GLIdiff

Convert z-scores back to raw diffusing capacity values using GLI (2017...

raw_GLIgl

Convert z-scores back to raw spirometric values using GLI global (2022...

raw_JRS

Convert z-scores back to raw spirometric values using JRS (2014) equat...

rspiro_check_input

Check input data for errors

rspiro_check_somat

Check somatometric input data

rspiro-package

rspiro: Brief overview of the package

zscore_GLI

Convert spirometric values to z-scores using GLI-2012 equations

zscore_GLIdiff

Convert diffusing capacity values to z-scores using GLI (2017) equatio...

zscore_GLIgl

Convert spirometric values to z-scores using GLI global (2022) equatio...

zscore_JRS

Convert spirometric values to z-scores using JRS (2014) equations

zscore_NHANES3

Convert spirometric values to z-scores using NHANES III equations

Implementation of various spirometry equations in R, currently the GLI-2012 (Global Lung Initiative; Quanjer et al. 2012 <doi:10.1183/09031936.00080312>), the race-neutral GLI global 2022 (Global Lung Initiative; Bowerman et al. 2023 <doi:10.1164/rccm.202205-0963OC>), the NHANES3 (National Health and Nutrition Examination Survey; Hankinson et al. 1999 <doi:10.1164/ajrccm.159.1.9712108>) and the JRS 2014 (Japanese Respiratory Society; Kubota et al. 2014 <doi:10.1016/j.resinv.2014.03.003>) equations. Also the GLI-2017 diffusing capacity equations <doi:10.1183/13993003.00010-2017> are implemented. Contains user-friendly functions to calculate predicted and LLN (Lower Limit of Normal) values for different spirometric parameters such as FEV1 (Forced Expiratory Volume in 1 second), FVC (Forced Vital Capacity), etc, and to convert absolute spirometry measurements to percent (%) predicted and z-scores.

  • Maintainer: Theodore Lytras
  • License: GPL (>= 2)
  • Last published: 2024-06-23