rstanarm2.32.1 package

Bayesian Applied Regression Modeling via Stan

adapt_delta

adapt_delta: Target average acceptance probability

as.matrix.stanreg

Extract the posterior sample

available-algorithms

Estimation algorithms available for rstanarm models

available-models

Modeling functions available in rstanarm

bayes_R2.stanreg

Compute a Bayesian version of R-squared or LOO-adjusted R-squared for ...

example_jm

Example joint longitudinal and time-to-event model

example_model

Example model

family.stanmvreg

family method for stanmvreg objects

family.stanreg

family method for stanreg objects

formula.stanreg

formula method for stanreg objects

get_y

Extract X, Y or Z from a stanreg object

kfold.stanreg

K-fold cross-validation

launch_shinystan.stanreg

Using the ShinyStan GUI with rstanarm models

log_lik.stanreg

Pointwise log-likelihood matrix

logit

Logit and inverse logit

loo.stanreg

Information criteria and cross-validation

loo_predict.stanreg

Compute weighted expectations using LOO

model.frame.stanmvreg

model.frame method for stanmvreg objects

model.frame.stanreg

model.frame method for stanreg objects

model.matrix.stanreg

model.matrix method for stanreg objects

neg_binomial_2

Family function for negative binomial GLMs

pairs.stanreg

Pairs method for stanreg objects

plot.predict.stanjm

Plot the estimated subject-specific or marginal longitudinal trajector...

plot.stanreg

Plot method for stanreg objects

plot.survfit.stanjm

Plot the estimated subject-specific or marginal survival function

posterior_interval.stanreg

Posterior uncertainty intervals

posterior_linpred.stanreg

Posterior distribution of the (possibly transformed) linear predictor

posterior_predict.stanreg

Draw from posterior predictive distribution

posterior_survfit

Estimate subject-specific or standardised survival probabilities

posterior_traj

Estimate the subject-specific or marginal longitudinal trajectory

posterior_vs_prior

Juxtapose prior and posterior

pp_check.stanreg

Graphical posterior predictive checks

pp_validate

Model validation via simulation

predict.stanreg

Predict method for stanreg objects

predictive_error.stanreg

In-sample or out-of-sample predictive errors

predictive_interval.stanreg

Predictive intervals

print.stanreg

Print method for stanreg objects

print.survfit.stanjm

Generic print method for survfit.stanjm objects

prior_summary.stanreg

Summarize the priors used for an rstanarm model

priors

Prior distributions and options

ps_check

Graphical checks of the estimated survival function

QR-argument

The QR argument

reexports

Objects exported from other packages

rstanarm-datasets

Datasets for rstanarm examples

rstanarm-deprecated

Deprecated functions

rstanarm-package

Applied Regression Modeling via RStan

se

Extract standard errors

stan_betareg

Bayesian beta regression models via Stan

stan_biglm

Bayesian regularized linear but big models via Stan

stan_clogit

Conditional logistic (clogit) regression models via Stan

stan_gamm4

Bayesian generalized linear additive models with optional group-specif...

stan_glm

Bayesian generalized linear models via Stan

stan_glmer

Bayesian generalized linear models with group-specific terms via Stan

stan_jm

Bayesian joint longitudinal and time-to-event models via Stan

stan_lm

Bayesian regularized linear models via Stan

stan_mvmer

Bayesian multivariate generalized linear models with correlated group-...

stan_nlmer

Bayesian nonlinear models with group-specific terms via Stan

stan_polr

Bayesian ordinal regression models via Stan

stanmvreg-methods

Methods for stanmvreg objects

stanreg-draws-formats

Create a draws object from a stanreg object

stanreg-methods

Methods for stanreg objects

stanreg-objects

Fitted model objects

stanreg_list

Create lists of fitted model objects, combine them, or append new mode...

summary.stanreg

Summary method for stanreg objects

terms.stanmvreg

terms method for stanmvreg objects

terms.stanreg

terms method for stanreg objects

Estimates previously compiled regression models using the 'rstan' package, which provides the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the customary R syntax with a formula and data.frame plus some additional arguments for priors.

  • Maintainer: Ben Goodrich
  • License: GPL (>= 3)
  • Last published: 2024-01-18