Combined Total and Allele Specific Reads Sequencing Study
Sample data example for autosomal genes
Sample data example for X chromosome genes
Produce Xce estimates for mice with allele specific reads
Negative log likelihood for coefficients provided in results of the fi...
Optimization wrapper, maximizing either the joint model of total (TReC...
Reformatted data for autosomal set to be used as input to process func...
Reformatted data for chromosome X set to be used as input to process f...
A list object that should be used as input to optimization process fun...
Produce simulated counts
Example of results produced by optimizing step using process function ...
Example of results produced by optimizing step using process function ...
Analysis of combined total and allele specific reads from the reciprocal cross study with RNA-seq data.