RunLTMG function

Run Left-truncated mixed Gaussian

Functional implementation of Left-truncated mixed Gaussian. The internal functions of the scapGNN package.

.RunLTMG(object, Gene_use = NULL, k = 5, verbose, seed = 123)

RunLTMG(object, Gene_use = NULL, k = 5, verbose, seed = 123)

## S4 method for signature 'LTMG'
RunLTMG(object, Gene_use = NULL, k = 5, verbose, seed = 123)

Arguments

• object: A LTMG object
• Gene_use: using X numebr of top variant gene. input a number, recommend 2000.
• k: Constant, defaults 5.
• verbose: Gives information about each step.
• seed: Random number generator seed.

Returns

A list contains raw input data and LTMG results.

Details

RunLTMG

For more information, please refer to: DOI: 10.1093/nar/gkz655 and https://github.com/zy26/LTMGSCA.